Insertion junction: CLIP2.022211_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022211
Chromosome:chromosome 4
Location:3079148
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g225400 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCAGCAGCAGCCTGTGGCGCCCGTGTACTGCAACCCGGGTGCTGAA
Internal bar code:TCGGCCGGTGCATTGCGGTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:689
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCTCCACCCCACATTTGA
Suggested primer 2:GCAGTACCTATGACCGTCCG