Insertion junction: CLIP2.022248_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022248
Chromosome:chromosome 6
Location:1621461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261700 (1 of 1) K14815 - mRNA turnover protein 4 (MRT4) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATACGGCCCGCCCACCCAAGCTCCGCTCCACTCGCAACAGAAGTGG
Internal bar code:CTTAAAATGCTGAGGGCACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1211
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCACCTCTCCTACTCCG
Suggested primer 2:TCCGCCGGCATCTTCTTATC