Insertion junction: CLIP2.022327_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.022327
Chromosome:chromosome 2
Location:7028972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389763 HPAT4 Hydroxyproline O-arabinosyl transferase 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACAGCTGGGAGGTTTATTGGGGCTCTTAGTTTGGTCATCCGCCGTC
Internal bar code:GTCACCGAATATAAGGTATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3653
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCTTTGGCGTTTGCATC
Suggested primer 2:CCGCTAATGGTGTGTTCCCT