Gene: Cre09.g389763
Overview
| Common name: | HPAT4 |
| Defline: | Hydroxyproline O-arabinosyl transferase 4 |
| Description: | GT8 family; Shares a common domain with HPAT1 and HPAT2 |
| Synonyms: | Cre02.g124900.t1.1,g9650.t1,Cre02.g124900.t1.2,HPAT4 |
| Chromosome: | chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5) |
Protein Localization
A plasmid for expressing Cre09.g389763 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre09.g389763-Venus-3xFLAG
Imaged strain: CSI_LW12E4
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/a few small puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.022327_1 | CLIP2.022327 | intron | 80 | 6.1 |
| CLIP2.022327_2 | CLIP2.022327 | intron | 80 | 6.1 |
| CLIP2.029298_1 | CLIP2.029298 | intron | 80 | 6.1 |
| CLIP2.029298_2 | CLIP2.029298 | intron | 80 | 6.1 |
| CLIP2.045432_1 | CLIP2.045432 | CDS | 80 | 6.1 |
| CLIP2.045432_2 | CLIP2.045432 | CDS | 80 | 6.1 |
| CLIP2.049526_1 | CLIP2.049526 | intron | 80 | 6.1 |
| CLIP2.049526_2 | CLIP2.049526 | intron | 80 | 6.1 |
| CLIP2.049889_1 | CLIP2.049889 | intron | 80 | 6.1 |
| CLIP2.049889_2 | CLIP2.049889 | intron | 80 | 6.1 |
| LMJ.RY0402.058653_1 | LMJ.RY0402.058653 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.120237_1 | LMJ.RY0402.120237 | CDS | 73 | 5.5 |
| LMJ.RY0402.231927_1 | LMJ.RY0402.231927 | 3'UTR | 58 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | PTHR31485 PTHR31485:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G25265.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.