Insertion junction: CLIP2.045432_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.045432
Chromosome:chromosome 2
Location:7030049
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g389763 HPAT4 Hydroxyproline O-arabinosyl transferase 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGAAGGAGGTGAGCTATGGGATGTGAGCTCTGTTATGTGGGTTCCAGG
Internal bar code:GAGGCGGGGGGGTTTGGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4770
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAACACACCATTAGCGG
Suggested primer 2:GTATCCGCTGCTCAGTCCTC