Insertion junction: CLIP2.022626_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022626
Chromosome:chromosome 17
Location:3979197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTCTGGCCCTGCCCAGCGCGACCATTGAGGACGCCAGACCAGGCGTG
Internal bar code:GCGTCGCCATCTTAGGCAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGAGGCGCTGTAGCAA
Suggested primer 2:TGCCAAGCTGCAATACGGTA