Insertion junction: CLIP2.022672_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.022672
Chromosome:chromosome 2
Location:6433467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388400 RAT1 (1 of 1) PF07798 - Protein of unknown function (DUF1640) (DUF1640); Chloroplast tscA maturation factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAAGATGAAGGCCGAGATACGGTGCGAGGGAGCGCGGCGCCAGGGCA
Internal bar code:ATGGGGACCGTTAGAGGACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1777
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGTCCGTGTACTTGTC
Suggested primer 2:TGCCTCCTCTCCATAGTGCT