Insertion junction: CLIP2.023004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.023004
Chromosome:chromosome 7
Location:3468954
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335750 IFT88 (1 of 1) K16474 - intraflagellar transport protein 88 (IFT88); Intraflagellar Transport Protein 88 3'UTR
Cre07.g800815 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGCAGGCTCGGCCCCGAACTCCGGGTGAGAGGCGGCGCGGCTGACA
Internal bar code:GGAGGGAATCACATGAGCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2276
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTGTTTCGATCTCCCCA
Suggested primer 2:ATGGCCCCATCTGTACTCCT