Insertion junction: CLIP2.023081_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.023081
Chromosome:chromosome 12
Location:4376352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519500 CAX1,VCX1 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACACAGCATGTGCATCACAGTAACCAGACCCACCAGATTAGCATAA
Internal bar code:CTGGGGTTTCGTTCGTGCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3408
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTACTGGAATTTTCGCGG
Suggested primer 2:CTTCAGCTGGAACGTCAGGT