Gene: Cre12.g519500
Overview
| Common name: | CAX1,VCX1 |
| Defline: | (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein |
| Description: | Ca2+/Na+/possibly Co2+ transporter; Confers Ca2+, Na+, and Co2+ tolerance in yeast; Ca2+/H+ and Na+/H+ exchange activity observed using vacuolar-enriched membrane vesicles; Related to fungi and plants Ca2+/H+ antiporters (CAX); related to yeast VCX1 (or Manganese resistance 1); One of three paralogs in C.reinhardtii (Cre09.g409750, Cre12.g519500, Cre16.g649466); Co-orthologous with three CAX genes in Arabidopsis thaliana (AT1G55720.1, AT1G55730.1, AT3G13320.1) |
| Synonyms: | CAX1,VCX1,g12804.t1,Cre12.g519500.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2D10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.015397_1 | CLIP2.015397 | intron | 80 | 6.1 |
| CLIP2.015397_2 | CLIP2.015397 | intron | 80 | 6.1 |
| CLIP2.023081_1 | CLIP2.023081 | intron | 80 | 6.1 |
| CLIP2.023081_2 | CLIP2.023081 | intron | 80 | 6.1 |
| CLIP2.046493_1 | CLIP2.046493 | intron | 80 | 6.1 |
| CLIP2.046493_2 | CLIP2.046493 | intron | 80 | 6.1 |
| CLIP2.052158_1 | CLIP2.052158 | CDS | 80 | 6.1 |
| CLIP2.052158_2 | CLIP2.052158 | CDS | 80 | 6.1 |
| CLIP2.053945_1 | CLIP2.053945 | intron | 80 | 6.1 |
| CLIP2.053945_2 | CLIP2.053945 | intron | 80 | 6.1 |
| LMJ.RY0402.130012_1 | LMJ.RY0402.130012 | intron | 95 | 5.5 |
| LMJ.RY0402.130012_2 | LMJ.RY0402.130012 | intron | 95 | 5.5 |
| LMJ.RY0402.142618_1 | LMJ.RY0402.142618 | CDS/intron | 73 | 5.5 |
| LMJ.RY0402.159602_1 | LMJ.RY0402.159602 | CDS | 95 | 5.5 |
| LMJ.RY0402.159602_2 | LMJ.RY0402.159602 | CDS | 95 | 5.5 |
| LMJ.RY0402.168310_1 | LMJ.RY0402.168310 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.168310_2 | LMJ.RY0402.168310 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.251598_1 | LMJ.RY0402.251598 | intron | 95 | 5.5 |
| LMJ.RY0402.251598_2 | LMJ.RY0402.251598 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF01699 |
| PANTHER: | PTHR31503 |
| KEGG_ec: | |
| KEGG_orthology: | K07300 |
| KOG: | KOG1397 |
| Gene ontology terms:: | GO:0006812, GO:0006816, GO:0008324, GO:0015369, GO:0016021, GO:0055085 |
| Best arabidopsis TAIR name: | AT3G13320.1 |
| Best arabidopsis TAIR symbol: | atcax2,CAX2 |
| Best arabidopsis TAIR defline: | cation exchanger 2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.