Insertion junction: CLIP2.052158_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.052158
Chromosome:chromosome 12
Location:4375672
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519500 CAX1,VCX1 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACACACGGCCACGATGGCGGTGATAACGGTCAGTGCGCCAATGGAGG
Internal bar code:TGGATCAGGTCACTTCAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTATACAGAAGCCGTCC
Suggested primer 2:CGAACAGCGCAATCTGGATG