Insertion junction: CLIP2.046493_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046493
Chromosome:chromosome 12
Location:4377100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519500 CAX1,VCX1 (1 of 3) K07300 - Ca2+:H+ antiporter (chaA, CAX); CAX family cation antiporter, membrane protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGCGGCGCCATATCCCACGAACCTTTACTCCCGCGAAAATTCCAGT
Internal bar code:CATTCTGGAGTCTGCTATGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTGTGCAAACCCTCCG
Suggested primer 2:TGAGGTGAGGGCCGTATACA