Insertion junction: CLIP2.024041_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024041
Chromosome:chromosome 8
Location:1643097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365851 (1 of 2) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCATACCGTTGTTTCGCCAGCGGCAGGCTGCTGGTTCCCCCGTGTTTC
Internal bar code:AGCAATGTTTCATCTGTCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTTGTGTGCTCAGCTG
Suggested primer 2:GCACACGCATACAGCAAACA