Insertion junction: CLIP2.024298_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024298
Chromosome:chromosome 10
Location:1598340
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g429100 Putative prolyl-tRNA synthetase; (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTCCCCTCCCCCTCATTGCCAGCACCACCAATCCTGTCCCGCCCCAT
Internal bar code:TATAAAATATTTGATACGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTAGAGGGAGAAGGA
Suggested primer 2:CGTCGTCCTCGTAGGTGATG