Insertion junction: CLIP2.024356_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024356
Chromosome:chromosome 17
Location:2684665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717100 (1 of 107) PF00069//PF07714 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGGTGGAGGGTCCGGGCTCTTCCCGCCTGCCCGCTCACCTCCCGCGC
Internal bar code:GGGATGCATAGATTTGACCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGTGGGGGTTTTACAT
Suggested primer 2:CAACCACAAAAGAGCTGGCC