Insertion junction: CLIP2.024464_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024464
Chromosome:chromosome 10
Location:1562728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428950 (1 of 1) PTHR11019//PTHR11019:SF97 - THIJ/PFPI // SUBFAMILY NOT NAMED 3'UTR
Cre10.g428966 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTTCCATCCCGTAGACGTGATCTGACGCGCATGTTGCGTGCGTCGTAC
Internal bar code:GCAAGTGATTTAGCCTGCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3338
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCTCATGGCTTATGC
Suggested primer 2:TTGGTTTGATTGCTGCCGTG