Insertion junction: CLIP2.024613_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024613
Chromosome:chromosome 17
Location:1947427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g710050 (1 of 6) PF03547 - Membrane transport protein (Mem_trans) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATCCAGGCACAGCCGCGTCGCCCCATCCCTGCGCCTGTGTGTGGCTA
Internal bar code:TGGGGTAGGGCTGTGCTGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1886
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAACAGCAATGGCAATG
Suggested primer 2:ACGAATGAGCCATCCGTTGT