Insertion junction: CLIP2.024716_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024716
Chromosome:chromosome 9
Location:796828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403900 FAP294 (1 of 5) PF13391 - HNH endonuclease (HNH_2); Coiled-Coil Flagellar Associated Protein 294 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTTCATAGTTGCTTACCCCACGCTTCAGAGCTTTTCTCCTCTTGCTGT
Internal bar code:TCCAGCCCGAGCGGAATTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1233
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGATTTCTCCACGCCAT
Suggested primer 2:TGAAGCTGCAGTCTCACTGG