Insertion junction: CLIP2.024952_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024952
Chromosome:chromosome 17
Location:3079464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720300 (1 of 6) PTHR27000//PTHR27000:SF160 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCCTTACCACCGCCACCTGTCTTTACCCATGTGCAATGCTGCGCCC
Internal bar code:AACCCCTTAGGGCGTGGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3557
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAATAGCCGCCCGTATC
Suggested primer 2:TTGTGCTGTTCGCGTTCAAG