Insertion junction: CLIP2.024995_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024995
Chromosome:chromosome 6
Location:4928911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281050 VPS5A (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTCTCGCCCCCCAGTTGTCATAGCCGCCCCCACCCGAAGGCACCGCTG
Internal bar code:TCGCGATTCCATAATTAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:6291
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGGCTTCTCCTTACTT
Suggested primer 2:ACTCACCCAAGTTCTCTGCG