Insertion junction: CLIP2.025127_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.025127
Chromosome:chromosome 11
Location:4193515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481550 (1 of 1) K03136 - transcription initiation factor TFIIE subunit alpha (TFIIE1, GTF2E1, TFA1, tfe) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGACCACCCAGCACGGTGCTGAAGTCGGTGCCGCCTCATGCGCCAGGT
Internal bar code:TCGATTGAATAACTGGGCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGTGGATGGAGTGTTGA
Suggested primer 2:TTCACATGAACGGCTACCCC