Insertion junction: CLIP2.025179_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.025179
Chromosome:chromosome 16
Location:7556828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683495 REX1-S,TFB5,REX1S (1 of 1) K10845 - TFIIH basal transcription factor complex TTD-A subunit (TTDA, GTF2H5, TFB5); TFB5 subunit of general Transcription Factor II H, involved in Nucleotide Excision Repair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTCGTGCTGATACTGCTACAATATTTTACCTATAGGAAGAAAGAAT
Internal bar code:ACCGCACGGTTGCCTTATACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4075
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GACGACAGACAAGTGGCAGA
Suggested primer 2:GCCAGCAGCAACCATTTGAA