Insertion junction: CLIP2.025353_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025353
Chromosome:chromosome 17
Location:2324949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g713650 MSH5 DNA mismatch repair protein, MutS homolog; (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAGCTGGGTCCCGACCTGCTACTGCTCAGCAGCAAGTCAGACGCTGC
Internal bar code:AATTGCAGGTCGAATGTTCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1270
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTTCCTCCTCCCCTTCCT
Suggested primer 2:TGTGGTCTTGGCTAAGCTGG