| Common name: | MSH5 |
| Defline: | DNA mismatch repair protein, MutS homolog; (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) |
| Description: | Orthologous to MSH5 (AT3G20475) in Arabidopsis thaliana; May form a complex with MutL (see MLH genes); |
| Synonyms: | g17280.t1,MSH5 |
| Chromosome: | chromosome 17 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.008350_1 | CLIP2.008350 | intron | 80 | 6.1 |
| CLIP2.008350_2 | CLIP2.008350 | intron | 80 | 6.1 |
| CLIP2.013649_1 | CLIP2.013649 | intron | 80 | 6.1 |
| CLIP2.013649_2 | CLIP2.013649 | intron | 80 | 6.1 |
| CLIP2.025353_1 | CLIP2.025353 | CDS | 80 | 6.1 |
| CLIP2.025353_2 | CLIP2.025353 | CDS | 80 | 6.1 |
| CLIP2.039615_1 | CLIP2.039615 | CDS | 80 | 6.1 |
| CLIP2.039615_2 | CLIP2.039615 | CDS | 80 | 6.1 |
| CLIP2.045793_1 | CLIP2.045793 | intron | 80 | 6.1 |
| CLIP2.045793_2 | CLIP2.045793 | intron | 80 | 6.1 |
| LMJ.RY0402.090142_1 | LMJ.RY0402.090142 | intron | 95 | 5.5 |
| LMJ.RY0402.090142_2 | LMJ.RY0402.090142 | intron | 95 | 5.5 |
| LMJ.RY0402.093581_1 | LMJ.RY0402.093581 | intron | 73 | 5.5 |
| LMJ.RY0402.094714_1 | LMJ.RY0402.094714 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.121930_3 | LMJ.RY0402.121930 | CDS | 58 | 5.5 |
| PFAM: | PF00488, PF05192 |
| PANTHER: | PTHR11361 PTHR11361:SF20 |
| KEGG_ec: | |
| KEGG_orthology: | K08741 |
| KOG: | |
| Gene ontology terms:: | GO:0005524, GO:0006298, GO:0030983 |
| Best arabidopsis TAIR name: | AT3G20475 |
| Best arabidopsis TAIR symbol: | ATMSH5,MSH5 |
| Best arabidopsis TAIR defline: | MUTS-homologue 5 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.