Insertion junction: LMJ.RY0402.094714_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.094714
Chromosome:chromosome 17
Location:2253601
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g713650 MSH5 DNA mismatch repair protein, MutS homolog; (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGAGGGTGTGCGGTTCGTGCGCGTGCA
Internal bar code:ACGTAGGAATGTATGGGAGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:99.2999
LEAP-Seq n confirming:7092
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCTCACTGTATTGCT
Suggested primer 2:AACTTGAGCTGCCCTTCAAA