Insertion junction: CLIP2.025394_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025394
Chromosome:chromosome 10
Location:3245207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g442600 UAPA2,XUV5 Xanthine/uracil/vitamin C permease-like; (1 of 4) PTHR11119//PTHR11119:SF36 - XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATCGCCAATGCTGCCGACACCCTTGCGCACATGCGCTCGCACCAAC
Internal bar code:GTAATTGGCGCTGTCGTGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:5724
LEAP-Seq percent confirming:99.0654
LEAP-Seq n confirming:106
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTTTACCAGCCGTGTC
Suggested primer 2:CAAGGGGCGGGAAGATCTTT