Insertion junction: CLIP2.025475_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025475
Chromosome:chromosome 2
Location:8065461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g144550 (1 of 4) PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGAGGGGGCGCGGCGCGCGGGGCGCGGCGCGGGGCGCGTGCTTGCAG
Internal bar code:AGTAGGGTTACAAACTCGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2898
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCCAGTCAGGTGAGTCG
Suggested primer 2:GCAACCACTAATAGCGCTGC