Insertion junction: CLIP2.025517_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025517
Chromosome:chromosome 3
Location:8687455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209281 (1 of 1) IPR000547//IPR001680//IPR011990//IPR015943//IPR017986 - Clathrin, heavy chain/VPS, 7-fold repeat // WD40 repeat // Tetratricopeptide-like helical domain // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATTTGCCAGATGACATCCCTGTACCCAGGCGCTGTGCTTTCCCACGG
Internal bar code:TAATTGCCCAAATTAAACCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATTCCATTCCAGCCACC
Suggested primer 2:ACGTGAGTGTAGGTGTGCAG