Insertion junction: CLIP2.025690_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.025690
Chromosome:chromosome 9
Location:5921053
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATCCTCCTCGTCAGGAAGCAGCCCCTGGAGATCTCTGAGAGAAGGCC
Internal bar code:CGATTGTCTAGATCTGGCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1534
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTGGTGGATGGAAAGAA
Suggested primer 2:GTACACACACACACGCACAC