Insertion junction: CLIP2.025941_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.025941
Chromosome:chromosome 10
Location:5578433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458350 SRR16 (1 of 1) PTHR22803//PTHR22803:SF55 - MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED // C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 162; Scavenger receptor cysteine rich (SRCR) protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAACGGTGCACACCGGCGAGGTAAAGCACGGGCCGGCGGTACCTCATT
Internal bar code:ACTCATTAATGGTTAGAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGCATCAACTCTGTGGGA
Suggested primer 2:GCAGCGTTTGTTTGGGTCAT