Insertion junction: CLIP2.025968_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.025968
Chromosome:chromosome 6
Location:2603050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269950 CDC48,EZY21,NSG14 (1 of 1) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48); Cell Division Cycle protein 48 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGCTGCGCGTGAACTGACACGCCCCACCGCGTCGCTCTCGCCTTTG
Internal bar code:CACAGCGTGTATCCGTCTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGTGGCCTCAAGTGG
Suggested primer 2:TTGCGAGTTACCCCTGTGAC