| Common name: | CDC48,EZY21,NSG14 |
| Defline: | (1 of 1) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48); Cell Division Cycle protein 48 |
| Description: | Protein involved in ubiquitin-dependent degradation of ER-bound substrates; Conserved AAA domain; Flagellar Associated Protein; higher plant homologue is involved in formation of ER in the cell division plane during cytokinesis (PMID: 12427991); CDC48 (p97) functions as an hexameric complex presenting ER-bound substrates either to the ubiquitination machinery (Ufd2) for degradation, or to Ufd3 and deubiquitiating enzymes for repair and recycling (PMID: 16793541) |
| Synonyms: | CDC48,NSG14,Cre06.g269950.t1.1,EZY21,g6057.t1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011738_1 | CLIP2.011738 | intron | 80 | 6.1 |
| CLIP2.011976_1 | CLIP2.011976 | intron | 80 | 6.1 |
| CLIP2.011976_2 | CLIP2.011976 | intron | 80 | 6.1 |
| CLIP2.019406_1 | CLIP2.019406 | intron | 80 | 6.1 |
| CLIP2.019406_2 | CLIP2.019406 | intron | 80 | 6.1 |
| CLIP2.025968_1 | CLIP2.025968 | intron | 80 | 6.1 |
| CLIP2.025968_2 | CLIP2.025968 | intron | 80 | 6.1 |
| CLIP2.043096_1 | CLIP2.043096 | intron | 80 | 6.1 |
| CLIP2.057334_1 | CLIP2.057334 | 5'UTR | 80 | 6.1 |
| CLIP2.057334_2 | CLIP2.057334 | 5'UTR | 80 | 6.1 |
| CLIP2.078287_1 | CLIP2.078287 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.093300_1 | LMJ.RY0402.093300 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.093300_2 | LMJ.RY0402.093300 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.190065_1 | LMJ.RY0402.190065 | intron | 95 | 5.5 |
| LMJ.RY0402.190065_2 | LMJ.RY0402.190065 | CDS | 95 | 5.5 |
| LMJ.RY0402.239921_1 | LMJ.RY0402.239921 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.239921_2 | LMJ.RY0402.239921 | 3'UTR | 95 | 5.5 |
| PFAM: | PF02359, PF02933, PF05496, PF07724, PF09336 |
| PANTHER: | PTHR23077 PTHR23077:SF82 |
| KEGG_ec: | EC:3.6.4.6 |
| KEGG_orthology: | K13525 |
| KOG: | KOG0730 |
| Gene ontology terms:: | GO:0005524, GO:0006281, GO:0006310, GO:0009378, GO:0016787 |
| Best arabidopsis TAIR name: | AT3G53230 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | ATPase, AAA-type, CDC48 protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.