Insertion junction: CLIP2.043096_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.043096
Chromosome:chromosome 6
Location:2608165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269950 CDC48,EZY21,NSG14 (1 of 1) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48); Cell Division Cycle protein 48 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAATAAGCCTCCTTCCACAGCATGGGGCCTGCTATCGTGAGAACGTG
Internal bar code:GACGACGCCGTTTGAAACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2509
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCATGCCTTCATTAACGG
Suggested primer 2:CTTCAAGGTGCGTGTGTGTG