Insertion junction: CLIP2.078287_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078287
Chromosome:chromosome 6
Location:2602290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269950 CDC48,EZY21,NSG14 (1 of 1) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48); Cell Division Cycle protein 48 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGTAAGTCTCCCGTTTTTCGCTTCAAAGCTTGAAATCCACGCAAGG
Internal bar code:CGTATGTTGCCGGAGGCGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTTGCCAACCTGCCTTG
Suggested primer 2:TAATCCACCTGGCAGCACTG