Insertion junction: CLIP2.026115_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.026115
Chromosome:chromosome 12
Location:1904510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511900 RPE1 Ribulose phosphate-3-epimerase, chloroplastic; (1 of 1) PTHR11749//PTHR11749:SF4 - RIBULOSE-5-PHOSPHATE-3-EPIMERASE // D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTGAGAGAGGCACAGTCATGATCTCTGCTTTGTGCATACACGGGTCC
Internal bar code:CCATTCCAGGGCGCAGCGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACCGATCCCTACTTGC
Suggested primer 2:CCAACTTTTGTTACCGCGCA