Gene: Cre12.g511900
Overview
| Common name: | RPE1 |
| Defline: | Ribulose phosphate-3-epimerase, chloroplastic; (1 of 1) PTHR11749//PTHR11749:SF4 - RIBULOSE-5-PHOSPHATE-3-EPIMERASE // D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE |
| Description: | Calvin-Benson-Bassham cycle enzyme |
| Synonyms: | RPE1,Cre12.g511900.t1.1,g12310.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2A05
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.026115_1 | CLIP2.026115 | intron | 80 | 6.1 |
| CLIP2.026115_2 | CLIP2.026115 | intron | 80 | 6.1 |
| CLIP2.056754_1 | CLIP2.056754 | 3'UTR | 80 | 6.1 |
| CLIP2.071857_1 | CLIP2.071857 | 3'UTR | 80 | 6.1 |
| CLIP2.071857_2 | CLIP2.071857 | 3'UTR | 80 | 6.1 |
| CLIP2.074591_1 | CLIP2.074591 | 3'UTR | 80 | 6.1 |
| CLIP2.074591_2 | CLIP2.074591 | 3'UTR | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00834 |
| PANTHER: | PTHR11749 PTHR11749:SF4 |
| KEGG_ec: | EC:5.1.3.1 |
| KEGG_orthology: | K01783 |
| KOG: | KOG3111 |
| Gene ontology terms:: | GO:0003824, GO:0004750, GO:0005975, GO:0006098, GO:0008152, GO:0016857 |
| Best arabidopsis TAIR name: | AT5G61410 |
| Best arabidopsis TAIR symbol: | EMB2728,RPE |
| Best arabidopsis TAIR defline: | D-ribulose-5-phosphate-3-epimerase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.