Insertion junction: CLIP2.056754_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056754
Chromosome:chromosome 12
Location:1905342
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511900 RPE1 Ribulose phosphate-3-epimerase, chloroplastic; (1 of 1) PTHR11749//PTHR11749:SF4 - RIBULOSE-5-PHOSPHATE-3-EPIMERASE // D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACGACACGCGTGCCCCGCGTGTTCGAATCGATGTAAATTTTGAGTTT
Internal bar code:GTGGGTTGGTTAATAGGTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4241
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGCGCGATTTTACTCA
Suggested primer 2:CAAGTAGGGATCGGTACCGC