Insertion junction: CLIP2.074591_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.074591
Chromosome:chromosome 12
Location:1905010
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g511900 RPE1 Ribulose phosphate-3-epimerase, chloroplastic; (1 of 1) PTHR11749//PTHR11749:SF4 - RIBULOSE-5-PHOSPHATE-3-EPIMERASE // D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCCCAAACCCGCAGCGGTACCGATCCCTACTTGCATCCGGAACGAA
Internal bar code:CGTTCAGAGATTGTGGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2009
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGCGGTAATGCCAGTCA
Suggested primer 2:ACTAAGGCCGCGAAACTCAA