Insertion junction: CLIP2.026140_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.026140
Chromosome:chromosome 7
Location:352409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314550 TRM8,TMG9 (1 of 1) PTHR23417//PTHR23417:SF16 - 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE // TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; tRNA (guanine-N7)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCAGCAGCAGCAGGGGGTGCGGGAGCAGAGGGAGCGGCATCAGGGGC
Internal bar code:TCGTAGTTGAAGGGTAGATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:444
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTCACGTACCCAAGTGA
Suggested primer 2:GTCATCCATGGCTTGGGGAA