Insertion junction: CLIP2.026327_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.026327
Chromosome:chromosome 12
Location:1805820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512700 (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGTATCCCAGCCCCAGGTGCCGCGTGCGCCGCTGCCTCACCGGCCG
Internal bar code:TATGCTCACTCTAATAAGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2175
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCAGACCCCAGAACTG
Suggested primer 2:CGATTCACGTAACTGCGCAG