Gene: Cre12.g512700
Overview
| Common name: | |
| Defline: | (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA |
| Description: | null-allele mutant was isolated (PMID 29743196) |
| Synonyms: | Cre12.g512700.t1.1,g12292.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g512700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g512700-Venus-3xFLAG
Imaged strain: CSI_LW06H12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.013419_1 | CLIP2.013419 | CDS | 80 | 6.1 |
| CLIP2.022068_1 | CLIP2.022068 | CDS | 80 | 6.1 |
| CLIP2.026327_1 | CLIP2.026327 | intron | 80 | 6.1 |
| CLIP2.026327_2 | CLIP2.026327 | intron | 80 | 6.1 |
| CLIP2.033294_1 | CLIP2.033294 | intron | 80 | 6.1 |
| CLIP2.033294_2 | CLIP2.033294 | intron | 80 | 6.1 |
| CLIP2.034888_3 | CLIP2.034888 | intron | 80 | 6.1 |
| CLIP2.034888_4 | CLIP2.034888 | intron | 80 | 6.1 |
| CLIP2.048470_1 | CLIP2.048470 | CDS | 80 | 6.1 |
| CLIP2.075942_1 | CLIP2.075942 | 3'UTR | 80 | 6.1 |
| CLIP2.075942_2 | CLIP2.075942 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.100030_1 | LMJ.RY0402.100030 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.165558_1 | LMJ.RY0402.165558 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF02186 |
| PANTHER: | PTHR12716 PTHR12716:SF8 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG3095 |
| Gene ontology terms:: | GO:0006367 |
| Best arabidopsis TAIR name: | AT4G20330 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Transcription initiation factor TFIIE, beta subunit |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.