Insertion junction: CLIP2.075942_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075942
Chromosome:chromosome 12
Location:1806366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512700 (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTCAGCTTGGGCTATGCAAACCTGAACTTCGTTTGCACGTGCAGCAC
Internal bar code:GTACGTTAAGTGGGTTTTGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTGGCCATAGGGTTTT
Suggested primer 2:GTTTGGAAGTTGACCCGCAC