Insertion junction: CLIP2.033294_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033294
Chromosome:chromosome 12
Location:1805534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512700 (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGGCAGCATGCAACAAGTGGGTTTCACCGAACACACCCGCGTGCTGT
Internal bar code:TGAACCGCCCGATATCAGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2568
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACCCTATGGCCAGCCTC
Suggested primer 2:CAAGCAGCAGGACCTACACA