Insertion junction: CLIP2.026327_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026327
Chromosome:chromosome 12
Location:1805834
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512700 (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCCAAGAGGCTGGCCATAGGGTTTTGGTATGATGGGAGGCAACAGT
Internal bar code:TGGGAATGGTTTCATTAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:657
LEAP-Seq percent confirming:13.6364
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTCACGTAACTGCGCAG
Suggested primer 2:CTCTGCAGACCCCAGAACTG