Insertion junction: CLIP2.034888_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.034888
Chromosome:chromosome 12
Location:1805823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g512700 (1 of 1) PTHR12716:SF8 - TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCTAGGTCTGGGCCAAGAGGCTGGCCATAGGGTTTTGGTATGATGG
Internal bar code:TATTATAGGTTCAGGGGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3724
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTCACGTAACTGCGCAG
Suggested primer 2:CAGCAAAACCTCGACACACG