Insertion junction: CLIP2.026394_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.026394
Chromosome:chromosome 6
Location:3005747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274350 HTR5,HTR29 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCTTGAAGTCCTGGGCAATCTCACGCACCAGGCGCTGGAATGGCAGCT
Internal bar code:TTTAGGCCCCTCGTTTATTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2670
LEAP-Seq percent confirming:78.3784
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:GCATAGTGGACGCATCAGGA