Insertion junction: CLIP2.026401_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.026401
Chromosome:chromosome 1
Location:1795334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010050 (1 of 18) 3.5.1.98 - Histone deacetylase / HDAC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACATGCGGCCTAGCCTGGAACGCTCGGTGCAGCACAACCGGCTGCAG
Internal bar code:CGTTCCGTAAAAGAGATCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1253
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACCGGTGGCTACGTTTG
Suggested primer 2:TACACATCGCTGCCACCAAT