Insertion junction: CLIP2.026409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.026409
Chromosome:chromosome 6
Location:1392174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259600 VPS53 Subunit of GARP complex; (1 of 1) PTHR12820//PTHR12820:SF0 - VACUOLAR SORTING PROTEIN 53 // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 53 HOMOLOG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGAGCAAAGCGGGCAAGCAGTGCTACAATCAGCGAAGTCGGCCCCAG
Internal bar code:GAGAGAAATATGGATGTACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2011
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGCTACCGCATGCAATC
Suggested primer 2:CACCCATGCTGCTCTTCTCA