| Common name: | VPS53 |
| Defline: | Subunit of GARP complex; (1 of 1) PTHR12820//PTHR12820:SF0 - VACUOLAR SORTING PROTEIN 53 // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 53 HOMOLOG |
| Description: | Expressed Protein. Similar to VPS53, a component of the GARP (Golgi-associated retrograde protein) complex |
| Synonyms: | VPS53,g5836.t1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.014605_1 | CLIP2.014605 | 5'UTR | 80 | 6.1 |
| CLIP2.014605_2 | CLIP2.014605 | 5'UTR | 80 | 6.1 |
| CLIP2.015715_1 | CLIP2.015715 | intron | 80 | 6.1 |
| CLIP2.015715_2 | CLIP2.015715 | intron | 80 | 6.1 |
| CLIP2.026409_1 | CLIP2.026409 | intron | 80 | 6.1 |
| CLIP2.026409_2 | CLIP2.026409 | intron | 80 | 6.1 |
| CLIP2.029986_1 | CLIP2.029986 | CDS | 80 | 6.1 |
| CLIP2.029986_2 | CLIP2.029986 | CDS | 80 | 6.1 |
| CLIP2.030252_1 | CLIP2.030252 | intron | 80 | 6.1 |
| CLIP2.030252_2 | CLIP2.030252 | intron | 80 | 6.1 |
| CLIP2.032134_1 | CLIP2.032134 | intron | 80 | 6.1 |
| CLIP2.032134_2 | CLIP2.032134 | intron | 80 | 6.1 |
| CLIP2.053391_1 | CLIP2.053391 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.065710_2 | LMJ.RY0402.065710 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.090176_1 | LMJ.RY0402.090176 | intron | 73 | 5.5 |
| PFAM: | PF10475 |
| PANTHER: | PTHR12820 PTHR12820:SF0 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG2180 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT1G50500 |
| Best arabidopsis TAIR symbol: | ATVPS53,HIT1,VPS53 |
| Best arabidopsis TAIR defline: | Membrane trafficking VPS53 family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.