Insertion junction: CLIP2.053391_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053391
Chromosome:chromosome 6
Location:1396701
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g259600 VPS53 Subunit of GARP complex; (1 of 1) PTHR12820//PTHR12820:SF0 - VACUOLAR SORTING PROTEIN 53 // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 53 HOMOLOG 5'UTR
Cre06.g259650 MPA7 Metallophosphoesterase/metallo-dependent phosphatase; (1 of 1) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTTGCCCCCGCTTTCTCCACGCCACTGATGAAGAAGCGGTCCTCATC
Internal bar code:GTGGCAAGGCGTGTCCTGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1902
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGACACGCAGGTTCTGAG
Suggested primer 2:GTCCTTGACGCAAAGGGGTA